Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816626.1_cds_XP_016498892.1_12868
CDS Infomation

[gene=LOC107817552] [db_xref=GeneID:107817552] [protein=protein NRT1/ PTR FAMILY 8.1-like] [protein_id=XP_016498892.1] [location=complement(join(12484..13339,13559..14115,14250..14467,14554..14659))] [gbkey=CDS]
Sequence

ATGGCAGAAGAAGATATCTATACCAAGGATGGAACTGTGGATTATCGGAATAAGCCTGCA
AATAAGAAGAAAACAGGAACTTGGAAGGCTTGCCCTTACATACTTGGGAATGAATGCTCT
GAAAGATTGGCATATTATGGGATGAGTACCAATCTTGTCCTTTATTTTAAGAATCAACTA
AATCAGCATAACACAACTGCTTCAAAAAATCAATCAAATTGGTCAGGGACATGCTATGTC
ATGCCTTTGCTCGGAGCATTTCTTGCTGATTCTTATCTTGGAAGATACTGGACTATTGCC
ATATTCTCTATTATCTATGTTTGTGGGATGACATTGTTGACAATTTCGGCATCAGTGCCA
GGGCTTAAGCCAACTTGCTATGAAAAAGATAAATGTCATGCGACCGACGGTCAAACTTCT
GTATTCTTTATTGCACTCTACTTAGTAGCACTGGGAACTGGAGGGATCAAGCCATGTGTC
TCATCCTATGGAGCAGACCAGTTCGATGATGCTGATCCTATTGAGAGAAACCACAAGAAT
TCCTTCTTTAATTGGTTCTACTTCTCCATCAATGTTGGGGCTCTCGTTGCTTCTTCATTG
ATAGTCTGGATACAACAAGACATTGGCTGGGGATGGGGGTTTGGTGTTCCTGCTGTGGCC
ATGGCACTTGCTGTTGTATCTTTCTTTTCAGGCACCCGGCTATATCGATACCAAAAGCCT
GGAGGCAGCCCTTTGACGCGTATATGCCAGGTTGTTGTGGCTTCTTTTAGAAAATACCGA
CTTGCATTGCCTGCTGAAAAATCTCTGCTACATGAGACTGCAGACGAAGCTGAATCTGCC
ATCAAAGGGAGTCGCAAACTTGCTCATACAAATGAGTTGAGTTTTTTCGACAAAGCTGCT
GTGAAGCTAGAGTCAGATGAGAATAGAGGTTCAATAAACAATTGGAGGCTTTGCACAGTA
ACGCAAGTTGAGGAGCTCAAGTCTGTTATCAAGTTGCTACCTATTTGGGCTACTGGAATT
ATCTTCAGCACAGTGTATAACCAAATGAGTAATATGTTTGTGCTGCAAGCTACATACATG
GATACACATTTAGGAAAATTTAGAATTCCTGAGGCTTCACTTTCTGTTTTTGACACCATG
GCTGTGATTCTCTGGGTTCCTATCTATGATAGACTGCTTATCCCATTTGTTCGAAAGTTT
ACAGGTCACAAAAATGGCTTGACTCAACTTCAACGGATGGGGACTGGGCTCGTCATATCA
GTCTTTGCAATGGTATCTGCAGCCATTGTAGAGGTAGTTAGGCTGGGCATAGTAAGAAGG
CACAATTACTATAACACCACCAATGTGCCAATGTCAGTATTTTGGCAAATTCCCCAATAT
ATGATAGTTGGTTGTGCTGAAGTTTTCACATTTATCGGTCAGTTGGAGTTTTTCTATGAT
CAAGCACCTGATTCAATGAGGAGCTTGTGCGCTGCCCTCTCTCTCACGACCACTGCACTT
GGAAGTTATGTGAGCTCGTTCTTAGTGACCATTGTCACAGATATTAGCACAAGGAATGGA
AAGCCAGGATGGATAGCGGACAATCAAAATCGCGGCAAGCTGCATTACTTCTTCTTGTTG
TTGGCCATTTTAAGTGTCTTAAACTTCTTTGCTTTTCTTGCGGTTGCAAAAAGGTACAAG
TATAAGAAGGCTATCAACAAAGACTCTGTTGCAATGGTGCCTGTTGATGATAAGTAA

Peptide Sequence

PEP ID

XP_016498892.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Nicotiana tabacum]
Sequence

MAEEDIYTKDGTVDYRNKPANKKKTGTWKACPYILGNECSERLAYYGMSTNLVLYFKNQL
NQHNTTASKNQSNWSGTCYVMPLLGAFLADSYLGRYWTIAIFSIIYVCGMTLLTISASVP
GLKPTCYEKDKCHATDGQTSVFFIALYLVALGTGGIKPCVSSYGADQFDDADPIERNHKN
SFFNWFYFSINVGALVASSLIVWIQQDIGWGWGFGVPAVAMALAVVSFFSGTRLYRYQKP
GGSPLTRICQVVVASFRKYRLALPAEKSLLHETADEAESAIKGSRKLAHTNELSFFDKAA
VKLESDENRGSINNWRLCTVTQVEELKSVIKLLPIWATGIIFSTVYNQMSNMFVLQATYM
DTHLGKFRIPEASLSVFDTMAVILWVPIYDRLLIPFVRKFTGHKNGLTQLQRMGTGLVIS
VFAMVSAAIVEVVRLGIVRRHNYYNTTNVPMSVFWQIPQYMIVGCAEVFTFIGQLEFFYD
QAPDSMRSLCAALSLTTTALGSYVSSFLVTIVTDISTRNGKPGWIADNQNRGKLHYFFLL
LAILSVLNFFAFLAVAKRYKYKKAINKDSVAMVPVDDK

Transcript Sequence

Gene sequence data has not been registered.